PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673440.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YC
Protein Properties Length: 113aa    MW: 12740 Da    PI: 9.8908
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673440.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC104.19e-33191001999
           NF-YC  19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     ++lPl+rikki+k+  edvkmis+eaP +++kacelfi +lt+rs+  + ++k+rtl+k di +av+ t++fdflv++v  +
  XP_020673440.2  19 NSLPLSRIKKIMKQsGEDVKMISCEAPLVFAKACELFIQQLTVRSYKVSVQAKKRTLQKDDIVTAVKATEVFDFLVEMVTAS 100
                     589*********96269************************************************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MRQAGIYSGM MWGKKPCPNS LPLSRIKKIM KQSGEDVKMI SCEAPLVFAK ACELFIQQLT  60
VRSYKVSVQA KKRTLQKDDI VTAVKATEVF DFLVEMVTAS NADDCMKTTR ERT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.38e-31NF-YC family protein