PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673450.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 205aa    MW: 22789.6 Da    PI: 8.4939
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.29.4e-18123156134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++C++ +Tp+WR gp+g+ktLCnaCG++y + +
  XP_020673450.1 123 CRHCKAEETPQWRLGPEGPKTLCNACGVRYNSGR 156
                     ******************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MIDLPAAAAR ATAEAEAEAL PDDVLLLDFS SDPNCNLDAP TPQLFQDIFD AAIDDPGSAV  60
DGEEEELEWL ANKDAFPPLE TSFDPVSRLP FRPPSRARSG GRRRRRKALP TFPPSTAPEK  120
KQCRHCKAEE TPQWRLGPEG PKTLCNACGV RYNSGRLVPE YRPANSPTFS AAIHSNSHRR  180
VMEIRRRKYG GRRGRPRVRL VSESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.12e-34GATA family protein