PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673480.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 142aa    MW: 15996 Da    PI: 5.0449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.4e-19653253
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ +
  XP_020673480.1  6 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLM 53
                    69******9.**********8.....334*********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MPKLLRYRGV RQRHWGSWVS EIRHPLLKTR IWLGTFETAE DAARAYDEAA RLMCGSNART  60
NFPPNSNSAS ALSPSLVAKL ERCCITSQEE MRRAKVEMEG EGEVCMDEEF IEEMIEELRY  120
NGSVEISSSS CSSSSASLFP NP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.15e-25ERF family protein