PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673599.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 234aa    MW: 26326.1 Da    PI: 10.2796
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.4e-0579101123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC++C k+F+++  L +H ++H
  XP_020673599.1  79 FKCKNCEKVFTSHQALGSHRSSH 101
                     89******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MFQFINHHIG SPVQLLVTVE CQDAAECSTS VLRITSTEEC STSKRRKVDY VVLPPTSPQP  60
EGPEPQVSKQ TLPNARQLFK CKNCEKVFTS HQALGSHRSS HKKLPLHKKR PKVHECSICK  120
RKFPSGQALG GHKRFHWRAS SSPDTTNQAF MSVVATELQA GNSSSGFNCR YPHTLRFRFL  180
ISTLGLNMPV PMNDFPEVRL YLDMPNTTMF VQPGRESTSE NASNVNMRRL TVGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.11e-11C2H2 family protein