PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673600.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 307aa    MW: 33814.9 Da    PI: 6.4479
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673600.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000131739123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y C  C+k+Fs+   L  H+r+H
  XP_020673600.2 17 YHCRLCDKRFSSGRALGGHMRVH 39
                    89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MPIIKKQKLQ EQEEEKYHCR LCDKRFSSGR ALGGHMRVHG MFNIEPILHP NEGPSTTGVE  60
GESSDGNRLL TSHICQNCGK ELCSLKSLSK HCCPGLVGAG EDDGENDKSN GLFSPSLPRS  120
RTPTPPLLLT EEEHVANFLV WLSTARANPV LRNIDAAECS SSVLHITGAE ECSTSERREA  180
DYVVLLPPSP QPENPEPHVS TQTPPNAHQN FECKTFQNVF TSHEALGGHR AIHKKVRGCF  240
ATRLEIKSPN MMKYTSIKDE SNNIIHQNNQ DEFSHQNNQA GASSESMALA IVPFEGTSSQ  300
LSLPKIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17180.11e-08C2H2 family protein