PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020673638.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TCP

Protein Properties

Length: 317aa MW: 33203.7 Da PI: 9.4573

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020673638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.8	9.7e-35	57	143	6	86
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec......eaesssssasnss 86 r++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl a+pai+ +tgt++ +a ++ + s++ssa +++ XP_020673638.1 57 GRSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLHHAEPAIISATGTGTVPAIATtvdgtlKIPSEVSSAPADR 143 599*********************************************************888884443232222222223332222 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MDSQLLDEED DRRKADAEPG GGGSAASTET TTHRLIMPKP EPMEFMGSLP LMKRQPGRSK 60 DRHTKVEGRG RRIRMPAACA ARIFQLTREL GHKSDGETIR WLLHHAEPAI ISATGTGTVP 120 AIATTVDGTL KIPSEVSSAP ADRRGVTTTS SVDGRRRKLQ PMRAASNSGV SLSTGLAPIL 180 AAPAVVPVLA FGGGSALPGA SPVWMIPSNY ALGAGPSTPV AAPVWTLPTP PHIIKFTGRP 240 FNAGVALPGA VELNLATAET DAQTAKLAKT AGPLNAELQL MGEAMDQNRG KAEYGKDKKG 300 EEQYARDNDS AEPLAGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	6e-43	TCP family protein