PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020673683.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WOX

Protein Properties

Length: 184aa MW: 21262.1 Da PI: 9.1065

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020673683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.6	2.8e-20	14	75	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF r+ps+e++++++++l +++ ++V++WFqN++a+e++ XP_020673683.1 14 KCGRWNPTAEQVKVLTDLFSAgLRTPSTEQIQKISSHLssfgKIENKNVFYWFQNHKARERH 75 568***************99************************************95 PP
2	Wus_type_Homeobox	109.8	1.6e-35	14	76	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++ RW+Pt+eQ+k+L++l+++GlrtP++e+iq+i+++L+++Gkie+kNVfyWFQN+kaRer++ XP_020673683.1 14 KCGRWNPTAEQVKVLTDLFSAGLRTPSTEQIQKISSHLSSFGKIENKNVFYWFQNHKARERHH 76 578**********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MEEAGLCNSR VGAKCGRWNP TAEQVKVLTD LFSAGLRTPS TEQIQKISSH LSSFGKIENK 60 NVFYWFQNHK ARERHHHYNK KRRRPPPAPT SPVHTDLFVL DHSDRREFQI TKLPGIWNEA 120 EEMKRGKKKT LELFPLTSND DYDVVEADQY KLVRNSPLRN NMVGELNLFD AVIEPPLDLS 180 LGFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	5e-37	WOX family protein