PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020673909.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 199aa    MW: 21413.3 Da    PI: 7.086
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020673909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.8e-056079221
                    EETTTTEEESSHHHHHHHHH CS
         zf-C2H2  2 kCpdCgksFsrksnLkrHir 21
                    +C+ Cgk F+++  L  H+r
  XP_020673909.1 60 PCTECGKLFPSWKALFGHMR 79
                    5******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MMNSSNPSSP PPADPPVSHP PLPPPNHPQR FPPPKPPAGA TKRRAPKKPE FSGMPEAIPP  60
CTECGKLFPS WKALFGHMRC HPERQWRGII PPPHSPRAQF TDEEHQVASS LVLLANGPPA  120
ETSSGELGGA AIIQPLSSSF DDSIKSKKRK GFRDQFSPSS SSSCFCSEDE CLLDLNLPPP  180
LESAEGGNSP VLELKLGFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.12e-22C2H2 family protein