PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674356.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 125aa    MW: 14127.5 Da    PI: 4.3622
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674356.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.28.9e-10105125121
                     ---SS-EEEEEEE--TT-SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                     ldDg++WrKYG+K vk+s++p
  XP_020674356.1 105 LDDGFRWRKYGKKAVKNSPNP 125
                     59*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MAALLEFIDQ FTNFSSFHFP EFYSDGQPEL DVYDYAEAED AHLFDESCLT FTGETEAVAA  60
AAAVVSTGKD GGEQRNGQEN DEVKRRKVEA EFRIGFRTKS EVEILDDGFR WRKYGKKAVK  120
NSPNP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
184120KRRKVEAEFRIGFRTKSEVEILDDGFRWRKYGKKAVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.15e-15WRKY family protein