PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674518.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 240aa    MW: 26225.9 Da    PI: 10.1966
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.1e-19105155255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  XP_020674518.1 105 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEQAAVAYDRAAYRMRG 155
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MFGSLELEPI RHHLLDVKEL PSSAAISPPP PMYRRSLSFG SIVADHWSDL PFHVDDSDDM  60
VVYLTLHDAF NHGWLPDGCK TTSIKPDPPS PPPPAPANFS SKRKHYRGVR QRPWGKFAAE  120
IRDPAKNGAR VWLGTFETAE QAAVAYDRAA YRMRGSRALL NFPLRICPDG VSSLAKRASP  180
ELSASLSSTP ISQSKVSPKR TKRVEASEGR SPSLPAALSS FPSTVPALVQ LQLPAQALAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.13e-49ERF family protein