PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674666.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 275aa    MW: 29728.1 Da    PI: 8.5899
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.00053212234123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C+ C + F + + +++H+r+H
  XP_020674666.1 212 FFCQVCERQFVTYHGMRVHQRVH 234
                     67*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDASIGRKAD TVIIASFAPP LFFNFNLSIP MNPSSDSAGP SRHGKRPMIH LFSSSSSESS  60
SSSSSSEGRR YAAAAAAAAE EEDKSTATQP ECYVCGRRFG NLKALFGHMR CHPEREWRGI  120
RPLAVGEEGS RGRRRWRRRT SEESAAAAAT AAGEYACGEC ARVFGTRQAL GGHRASHRGV  180
MGCSAKAKET TAAAGAALPD VRGGGAGDGR TFFCQVCERQ FVTYHGMRVH QRVHRERQGG  240
EAEGRREERG FMVDLNLPPP PEVAEEEDKP VANEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.16e-13C2H2 family protein