PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020674728.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NF-YB

Protein Properties

Length: 223aa MW: 24618.3 Da PI: 6.455

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020674728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	172.3	5.2e-54	27	123	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrf+Pianv+rim+kvlP++akis+daket+qecvse+isf+tsea+++cqre+rkti+++d+lwa+++lGf+dyvepl+v+l++yre eg XP_020674728.1 27 VREQDRFMPIANVIRIMRKVLPTHAKISDDAKETIQECVSEYISFITSEANERCQREQRKTITAEDVLWAMSKLGFDDYVEPLSVHLQRYREHEG 121 69********************************************************************************************9 PP NF-YB 96 ek 97 ++ XP_020674728.1 122 DH 123 96 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MNPCINNHIG GGVGGGGSGG AGNQCTVREQ DRFMPIANVI RIMRKVLPTH AKISDDAKET 60 IQECVSEYIS FITSEANERC QREQRKTITA EDVLWAMSKL GFDDYVEPLS VHLQRYREHE 120 GDHRGSIRGE PIQLKRAAAE GGVDNSPAVG VYGLPQLQAA YHFPATEPHH HHHHQHQHHH 180 FGVYGGAATG GEMGGYYMGV YGDPETGSSQ ELVDNFDLYA HYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	1e-62	NF-YB family protein