PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674895.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 121aa    MW: 14084.8 Da    PI: 7.2474
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.57.3e-203590258
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
                    +D y+W+KYGqK +++ +   sY+rC  ++C+++kkve   ++p+ ++i Yeg+Hn 
  XP_020674895.1 35 EDDYKWKKYGQKYIRSMQ-KNSYFRCVNKNCKTRKKVELPPNEPNNIDIAYEGDHNY 90
                    79************9765.68**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MESMASSKTT IIDEEQVQEQ NIVVAFSNGL FVIPEDDYKW KKYGQKYIRS MQKNSYFRCV  60
NKNCKTRKKV ELPPNEPNNI DIAYEGDHNY RALVGRSENE EARIAANQYD LATQMFGYAR  120
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.12e-14WRKY family protein