PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674907.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family G2-like
Protein Properties Length: 292aa    MW: 31878.9 Da    PI: 6.0736
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.81.6e-3085138155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_020674907.1  85 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 138
                     59*******************.********************************8 PP
2Myb_DNA-binding48.22.4e-1587137148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
   XP_020674907.1  87 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 137
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MREEVEPNWF PRWEEELPSP EELMPLSQSL ITPDLALAFD ILTPNPSSAP PPPPPPDFDS  60
PDLSAPPESV STGYAGEESA RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS  120
VDGLTRENVA SHLQKYRLYL KRMQGLSSSA AGPPMSAADA ATEHLFSSNP IPHPFLCRDG  180
SGQETYMQFL APPLLHQHQH MAAAAASVQN QQYYHQRQIR HLGSASDYGL FARGAAQPLG  240
LHRIGGSSIA MMQPPTMASL PTSYGDDMDS GSGRGDDDIN GGREEHAGMR GM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05090.18e-50G2-like family protein