PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674944.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YB
Protein Properties Length: 163aa    MW: 18214.4 Da    PI: 5.812
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB39.41.5e-12601262894
           NF-YB  28 skdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                      kda     e +  fi ++++ a+d c++ +r+tin++d++ al ++ f ++++pl+  l+++r+ +
  XP_020674944.1  60 HKDALIAFSESARIFIHYLSATANDICKESRRQTINAEDVFKALDDMEFTEFIQPLRDSLEEFRKKN 126
                     57788888999999**************************************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MAKGEAWDGT AATPATSTVV EELPKTIVRR VVKEKLFQLS SASSKKAKSG EVGDEEMMLH  60
KDALIAFSES ARIFIHYLSA TANDICKESR RQTINAEDVF KALDDMEFTE FIQPLRDSLE  120
EFRKKNAGRK SGTKGNGGTK KRKSEEELPH KDENEGNAYE ENN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123143RKKNAGRKSGTKGNGGTKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.11e-37NF-YB family protein