PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020674948.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 118aa    MW: 13687.4 Da    PI: 7.2495
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020674948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY50.34.6e-163587258
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
                    +D y+W+KYGqK +++ +      rC  ++C+++kkve   ++p+ ++i Yeg+Hn 
  XP_020674948.1 35 EDDYKWKKYGQKYIRSMQKN----RCVNKNCKTRKKVELPPNEPNNIDIAYEGDHNY 87
                    79*************99987....6******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MESMASSKTT IIDEEQVQEQ NIVVAFSNGL FVIPEDDYKW KKYGQKYIRS MQKNRCVNKN  60
CKTRKKVELP PNEPNNIDIA YEGDHNYRAL VGRSENEEAR IAANQYDLAT QMFGYART
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.13e-11WRKY family protein