PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020675140.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 195aa    MW: 21678 Da    PI: 10.0189
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020675140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.4e-09107148854
                     HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     + r RR+ri +++  L++l+P  +      K++ a++Le+Av+Y+k L
  XP_020675140.1 107 AARLRRERISERIRILQQLVPGgN------KMDTASMLEEAVRYVKFL 148
                     5699*****************955......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MADIDFMDFA PDTQMDWMEM LNQFNSSFEF SLQHSSSPPS QQNNHTTPPP CRIAPVSPEL  60
AGAQSVKAMK EMLFCLAALQ PVRINLELAK ARPRRNVRIS KEPQSVAARL RRERISERIR  120
ILQQLVPGGN KMDTASMLEE AVRYVKFLKA QVRAMEKVGG GGRTPAVLGF GGGLSYFQNQ  180
ISDGEGLLNA AQMLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109114RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-28bHLH family protein