PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020675694.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 236aa    MW: 26091.2 Da    PI: 10.6402
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020675694.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H221.56.1e-076890123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++Cg+sF+++  L  H++ H
  XP_020675694.2 68 FECHYCGRSFPTSQALGGHQNAH 90
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MSQKETHDFM NVSSFSQLPF IRPTQTKDKP SSSTSATAAA IRLFGIDVPH EPTTIATTTT  60
SHDTSRKFEC HYCGRSFPTS QALGGHQNAH KRERQHAKRA QLQSAMAAAH HRSSPIDRHH  120
IYHHLGPFST SRFSLLSTSY HSNHSSWSTQ PPPPPIHGSP LPPLWRARTP VQAGIRPILP  180
FFGGDGLRRV GDGDSSSSTI SSISPQNRLV CEPIEGGKEN THDRAKRAKV SFNLYM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41940.13e-24C2H2 family protein