PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020675762.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 145aa MW: 15954 Da PI: 9.0899

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020675762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.7	2.2e-37	43	98	4	59
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 ++l+cprC s++tkfCy+nny+++qPr+fCkaC+ryWt+GGalrnvPvG+grr+++ XP_020675762.1 43 AELPCPRCRSQETKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRRSR 98 5789*************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MADIGEEAPA FKLFGTVIVA DENRLKKNSQ PPPPLSSSEA AAAELPCPRC RSQETKFCYF 60 NNYNVNQPRH FCKACHRYWT AGGALRNVPV GAGRRRSRFY ARTGGETAAE GGRVDFTAEV 120 ERWLLRREQM PAAGGKLSNA ASESC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34140.1	2e-33	Dof family protein