PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020675788.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 246aa    MW: 27919.9 Da    PI: 9.9269
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020675788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.96.7e-19125158134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C ttkTplWR+gp g+k+LCnaCG+++rk +
  XP_020675788.1 125 CSDCSTTKTPLWRSGPHGPKSLCNACGIRQRKAR 158
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MTPFYNCQIP QFPLENENQR QSHIPFLSLA TSTSSTSPYP FFLHNQQDHI ALDHGVLPHH  60
QAHLQEEYIK EVDQQQGPVK WMSSKMRIMR KMLNSNQTPK IKTRRNNHQH QDQKQAAQDN  120
IIRVCSDCST TKTPLWRSGP HGPKSLCNAC GIRQRKARRA MAASAMSSGA VLKDGKDKAS  180
DFVDRTVPFK KRCRFATEGC VTTQRKLCFE DIVVSLNKSS ANFHRVFPQD EKDAAILLMA  240
LSCGLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.12e-19GATA family protein