PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020676154.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 356aa MW: 38758.8 Da PI: 5.0067

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020676154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.1	2.9e-16	165	217	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +lkr rr+ +NRe+ArrsR+RK+a ++ Le v++L +eN +L k+l e +++ XP_020676154.1 165 DLKRMRRMVSNRESARRSRKRKQAHLADLELQVDQLRGENASLYKQLTETNQT 217 79*****************************************9777776655 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MKKSASDWDL DELLPELLRP VESPPSHGAA ESGGSRRSPS VASEELLARW MMSKIMDGLG 60 DSGGDDGNIT DIFGFSDRDA PTSHSPGGPL TGSQIWSQNP TTLHSSITTT IESQYSISAG 120 SPTSSLMLKS TENQAPGGTS GSEQSDDESL ETEAGVYEHG TNTNDLKRMR RMVSNRESAR 180 RSRKRKQAHL ADLELQVDQL RGENASLYKQ LTETNQTFTE SVTDNRILKS GVEALRVKVK 240 MAEDMISRGS LTCSLDHLLQ TTINSSHLLN ARQFPPTIEL QENDGFFMGS SLASQVQNIE 300 VQEAGTKNGT LRSQSPPLPS LTSLNNLQSR INGDISSCGT DMWPWDSHPN VISKHV

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MKKSASDWDL DELLPELLRP VESPPSHGAA ESGGSRRSPS VASEELLARW MMSKIMDGLG  60
DSGGDDGNIT DIFGFSDRDA PTSHSPGGPL TGSQIWSQNP TTLHSSITTT IESQYSISAG  120
SPTSSLMLKS TENQAPGGTS GSEQSDDESL ETEAGVYEHG TNTNDLKRMR RMVSNRESAR  180
RSRKRKQAHL ADLELQVDQL RGENASLYKQ LTETNQTFTE SVTDNRILKS GVEALRVKVK  240
MAEDMISRGS LTCSLDHLLQ TTINSSHLLN ARQFPPTIEL QENDGFFMGS SLASQVQNIE  300
VQEAGTKNGT LRSQSPPLPS LTSLNNLQSR INGDISSCGT DMWPWDSHPN VISKHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	186	RRSRKRK
2	180	187	RRSRKRKQ
3	182	187	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	5e-49	bZIP family protein