PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020676225.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WOX
Protein Properties Length: 218aa    MW: 25163.6 Da    PI: 7.6173
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020676225.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.11.5e-1899159257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     r+R+ +t+ ql++Le+ F++   +ps+++++e++++l    ++t+ +V++WFqN+Ra+ kk
  XP_020676225.2  99 RQRWIPTSMQLQILEDIFRQgYGTPSKQKIAEITSELakhgHVTDVKVYNWFQNKRARSKK 159
                     89*****************99**************************************98 PP
2Wus_type_Homeobox92.83.1e-3098161265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ar+RW Pt+ Q++iLe+++++G  tP+k++i +it+eL+++G+++d  V++WFQN++aR+++kq
     XP_020676225.2  98 ARQRWIPTSMQLQILEDIFRQGYGTPSKQKIAEITSELAKHGHVTDVKVYNWFQNKRARSKKKQ 161
                        689***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MAWERGGSSN MNHGRIYEEE RAMGDWQGIL DGVLYMKVMT DEQIEVLRRQ ISIYATICEQ  60
LVVMHRTFTS QQEALAGMKF GTMLYNPLVS AEVPKVAARQ RWIPTSMQLQ ILEDIFRQGY  120
GTPSKQKIAE ITSELAKHGH VTDVKVYNWF QNKRARSKKK QAESEAEIES SGRKKTKVEE  180
THESEDDASG LQYQMTTPRG ELFNYRNLAC DLKFEWSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.12e-53WOX family protein