PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020676410.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 264aa MW: 30494.2 Da PI: 6.3132

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020676410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.9	1.4e-51	10	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deel+++yL+kkv++++ + ++ evd++++ePw+Lp+ +k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd+ v++ XP_020676410.1 10 LPPGFRFYPSDEELICHYLQKKVANESASQ-GTLVEVDLHRLEPWELPEVAKMSLNEWYFFSFRDRKYATGLRTNRATRSGYWKATGKDRMVYNP 103 79***********************888.88***********87788889**********************************8 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + + vg++ktLvfy+grap+g kt+Wvmhe+rle XP_020676410.1 104 rTLSMVGMRKTLVFYHGRAPSGLKTNWVMHEFRLE 138 55677*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MGLREVESTL PPGFRFYPSD EELICHYLQK KVANESASQG TLVEVDLHRL EPWELPEVAK 60 MSLNEWYFFS FRDRKYATGL RTNRATRSGY WKATGKDRMV YNPRTLSMVG MRKTLVFYHG 120 RAPSGLKTNW VMHEFRLETP HSPPKEDWVL CRVFHKRKGE GEKETMSNGY NTNSPTFQYS 180 SSLIATEQQP LGSEELNWCS LSTSKYTEND HNSSFIQNLM ECNTGNIDEQ CGPLWDVGLD 240 GSHGIVSFEE LGFSIERKDN NIYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	2e-80	NAC family protein