PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020676479.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 357aa MW: 37830.8 Da PI: 7.2734

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020676479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	65.7	8.3e-21	239	301	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++elkrerrkq+NRe+ArrsR+RK++e++eL++kv eL ++N+aL+ ele+l k + l++e+ XP_020676479.1 239 DRELKRERRKQSNRESARRSRLRKQQECDELARKVSELNSQNSALRMELEQLHKVCRDLEAEN 301 689*******************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGSPGETSTP AKPPNSTPFT AATTPPPAYT AEWAASLQAY YSGNAAAPTA FFPPVWGGQH 60 IMSPYATPIA YSPMYAPGAV YAHPSMTPGM GYPNADSGNI KSKGALLKFG EGGKAGSGSG 120 EEENSQSGGS ATEGSSDTGN ESADPQENSK KRSSGDAFQE GEASHPAIAT PRKRAPKLPV 180 SAPGRTALPG PATNLNIGMD IWNPPHTGPA PLKVRPNATI ASAAGANVLM VENQWAQDDR 240 ELKRERRKQS NRESARRSRL RKQQECDELA RKVSELNSQN SALRMELEQL HKVCRDLEAE 300 NQHIADELSS IREESSSTLK QGVGDHIDTI PLSSTTTSTK MNGKLYHPGG NPDPSSR

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGSPGETSTP AKPPNSTPFT AATTPPPAYT AEWAASLQAY YSGNAAAPTA FFPPVWGGQH  60
IMSPYATPIA YSPMYAPGAV YAHPSMTPGM GYPNADSGNI KSKGALLKFG EGGKAGSGSG  120
EEENSQSGGS ATEGSSDTGN ESADPQENSK KRSSGDAFQE GEASHPAIAT PRKRAPKLPV  180
SAPGRTALPG PATNLNIGMD IWNPPHTGPA PLKVRPNATI ASAAGANVLM VENQWAQDDR  240
ELKRERRKQS NRESARRSRL RKQQECDELA RKVSELNSQN SALRMELEQL HKVCRDLEAE  300
NQHIADELSS IREESSSTLK QGVGDHIDTI PLSSTTTSTK MNGKLYHPGG NPDPSSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	256	262	RRSRLRK
2	256	263	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-44	bZIP family protein