PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020676480.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 335aa MW: 35580.2 Da PI: 7.7244

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020676480.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	65.7	8.1e-21	217	279	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++elkrerrkq+NRe+ArrsR+RK++e++eL++kv eL ++N+aL+ ele+l k + l++e+ XP_020676480.1 217 DRELKRERRKQSNRESARRSRLRKQQECDELARKVSELNSQNSALRMELEQLHKVCRDLEAEN 279 689*******************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MGSPGETSTP AKPPNSTPFT AATTPPPAYT AEWAASLQAY YSGNAAAPTA FFPPVWGGQH 60 IMSPYATPIA YSPMYAPGAV YAHPSMTPGM GYPNADSGNI KSKGALLKFG EGGKAGSGSG 120 EEENSQRSSG GSATEGSSDT GNESADPQEN SKKRSSGDAF QEGEASHPAI ATPRKRAPKL 180 PVSAPGRTAL PGPATNLNIG MDIWNPPHTG PAPLKDDREL KRERRKQSNR ESARRSRLRK 240 QQECDELARK VSELNSQNSA LRMELEQLHK VCRDLEAENQ HIADELSSIR EESSSTLKQG 300 VGDHIDTIPL SSTTTSTKMN GKLYHPGGNP DPSSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	240	RRSRLRK
2	234	241	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.2	5e-40	bZIP family protein