PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020676646.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 258aa    MW: 28269.7 Da    PI: 8.2238
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020676646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.6e-173887255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae Aa a+++a+  l+g
  XP_020676646.1 38 KFVGVRQRP-SGRWVAEIKDST---QKIRLWLGTFETAEAAALAYDEAACLLRG 87
                    799******.7*********32...36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MDLNQKNQIP HFSPLQSTKL KPKTKLITNS GVGGPANKFV GVRQRPSGRW VAEIKDSTQK  60
IRLWLGTFET AEAAALAYDE AACLLRGSNT RTNFSNRRPS DGSASADSPL SARIRKLLHH  120
KKLPLNGKAS PQHHKNGSFR PSGAIAAASS GSGVSSPASE RKQEIYSPWF AEAAVETMFN  180
GLELSDKGCR WPELDGSGAA EEVGVFERMR EERQTSASLY AMNGVQEYFE AMQDLSVSPS  240
SFDAVLDFPP FLYELDEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-25ERF family protein