PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020676808.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family CAMTA
Protein Properties Length: 162aa    MW: 19157.7 Da    PI: 7.8266
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020676808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1167.91.6e-52321445117
            CG-1   5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 
                     ++rw +++e++aiL+n +++++  ++ ++p++gs++L++rk++r+frkDGy+wkkkkdgktv+E+hekLK+g+ e +++yYa++e++p+f rrcy
  XP_020676808.1  32 STRWFRPNEVHAILTNSTHFTVLPQPVENPTNGSIVLFDRKMLRNFRKDGYNWKKKKDGKTVQEAHEKLKIGNEERIHVYYARGEDDPNFYRRCY 126
                     89********************************************************************************************* PP

            CG-1 100 wlLeeelekivlvhylev 117
                     wlL+++le+ivlvhy+++
  XP_020676808.1 127 WLLDKKLEHIVLVHYRQT 144
                     ***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MDPSLIPLAG GEVHGFRTLA DLDITKLRED ASTRWFRPNE VHAILTNSTH FTVLPQPVEN  60
PTNGSIVLFD RKMLRNFRKD GYNWKKKKDG KTVQEAHEKL KIGNEERIHV YYARGEDDPN  120
FYRRCYWLLD KKLEHIVLVH YRQTLEEEHT SSNFEDSRFM IV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16940.13e-66CAMTA family protein