PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020676809.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family CAMTA
Protein Properties Length: 120aa    MW: 14316.3 Da    PI: 8.4502
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020676809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1137.25.4e-432010235117
            CG-1  35 ksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117
                       gs++L++rk++r+frkDGy+wkkkkdgktv+E+hekLK+g+ e +++yYa++e++p+f rrcywlL+++le+ivlvhy+++
  XP_020676809.1  20 ADGSIVLFDRKMLRNFRKDGYNWKKKKDGKTVQEAHEKLKIGNEERIHVYYARGEDDPNFYRRCYWLLDKKLEHIVLVHYRQT 102
                     679*****************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MDPSLIPLAG GEVHGFRTLA DGSIVLFDRK MLRNFRKDGY NWKKKKDGKT VQEAHEKLKI  60
GNEERIHVYY ARGEDDPNFY RRCYWLLDKK LEHIVLVHYR QTLEEEHTSS NFEDSRFMIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16940.12e-43CAMTA family protein