PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020676982.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 155aa    MW: 17183.3 Da    PI: 10.5614
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020676982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.4e-162876355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++GVr +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a   l+g
  XP_020676982.1 28 FRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVYLLRG 76
                    8*****99.**********9...336*********************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MERNCFSRRP AVSEERRGSA ARGKDRAFRG VRMRKWGKWV AEIREPNKRS RIWLGSYSSP  60
VAAARAYDTA VYLLRGRSAL LNFPDELAAD ESGEANTALS AASIRKKAAE VGARVDALQQ  120
QKQQAPPLPP PPRPRPDLNE QPSPETTEEE VISSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.13e-41ERF family protein