PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677103.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family FAR1
Protein Properties Length: 174aa    MW: 19829.9 Da    PI: 7.075
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.32.9e-14102169270
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkk 70 
                     ++++YA++ GFsv+k++++   ++++i++++fvCsk g++++ + + +++r tr+  rtgC  +++   
  XP_020677103.1 102 CFCTYAHDNGFSVQKDHHSFWPNSRKIKSKDFVCSKAGFKKSIDLN-SRKRFTRPYVRTGCPSMVRFVT 169
                     799***************************************9999.99***************98755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MSMCKSASAR DDSDQQAQAS RTSASGVAME RSGTGRATTG GKEEHTRITR RKNELENCRE  60
EIECSAKREV EEGMEEGVHE SERMHESEGL TVYKDEKEAY ECFCTYAHDN GFSVQKDHHS  120
FWPNSRKIKS KDFVCSKAGF KKSIDLNSRK RFTRPYVRTG CPSMVRFVTD EDGY