PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677214.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 353aa    MW: 38503.7 Da    PI: 6.8451
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.5e-0959108154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r++ +  rE+ RRdr+N+ f eL   + ++     +K++Ka+iL  Av  +k+L
  XP_020677214.1  59 RKVHKADREKLRRDRLNEQFLELGNAIDPD----RPKNDKATILGDAVLMLKDL 108
                     5677889********************997....79************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MDQWKPAEGF FQGMAVTGIS GNDFGREGDP GVWSGGLPVP CPDSSQRVDK EAKDSSNVRK  60
VHKADREKLR RDRLNEQFLE LGNAIDPDRP KNDKATILGD AVLMLKDLTA QVQKLKAEHT  120
SLSEESRELT QEKNELREEK SVLKSEIENL NAQHQQRLGC LYPWATVDPS VVMGPPSAYP  180
FPIPVPVASG PMPFHAPIPL YPFFQNQRPA AIPSHCSSYH PYTSSRSPYV EQQPSQHLPP  240
HPIPSNDNNH NTSRHESQSG SSDWLRCSGS DRSTDFSDVV TELELKMPGS AKPCNSKPAN  300
LLTEGRKGCR SRQLQGKASE NLDGSSSSRC SSPPGLPASS SNSNGGGSVA NSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.17e-67bHLH family protein