PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677222.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 134aa    MW: 14806.9 Da    PI: 10.2278
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-171261255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  XP_020677222.1 12 PYRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYASPVAAARAYDTAVFYLRG 61
                    59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
METSPSEQKQ RPYRGVRMRK WGKWVAEIRE PNKRSRIWLG SYASPVAAAR AYDTAVFYLR  60
GRSAFLNFPD DIPSADSGGI GGGLSATFVR KRAAEVGEAV DALLLQKKAK KMGMGFKFPD  120
LNCQPSADES YGDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.18e-45ERF family protein