PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020677360.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

MYB_related

Protein Properties

Length: 174aa MW: 19667.4 Da PI: 8.7747

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020677360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.7	3.6e-15	92	139	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ede+l + v ++G g+W+ ++++ g+ R++k+c++rw +yl XP_020677360.1 92 KGLWSPDEDEKLFNHVIRFGIGCWSFVPKRAGLQRCGKSCRLRWINYL 139 678*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MQAGGLCVGK ALKLLARERE RESGLDRGSF AVVLIARASV QSQDSSRNCG MRCKRRRTDR 60 LSQEFSQSLA CFAALNKSQN GNSFMLSEAE VKGLWSPDED EKLFNHVIRF GIGCWSFVPK 120 RAGLQRCGKS CRLRWINYLR PNLKRGSFSQ DEEDLIISLH EVLGNSDEDI DKCY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	8e-41	MYB family protein