PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020677375.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WRKY

Protein Properties

Length: 147aa MW: 16773.1 Da PI: 9.5594

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020677375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.3	1.2e-31	67	125	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vk+ fprsYYrC++ +C+vkk+v+r ++d +v++tYeg Hnh+ XP_020677375.1 67 LDDGFRWRKYGQKKVKNCSFPRSYYRCSQLTCNVKKQVQRLSSDAAIVVTTYEGVHNHP 125 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence
MEPQQNFPPI LSQQGPPFPI LPEASGLHFC SSSSILGGDE QNKGKGRGKK ESRPRFVFQT 60 RSESDILDDG FRWRKYGQKK VKNCSFPRSY YRCSQLTCNV KKQVQRLSSD AAIVVTTYEG 120 VHNHPCEKLM ETLSPLLNQM QFLSQFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46130.1	1e-53	WRKY family protein