PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677494.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family G2-like
Protein Properties Length: 313aa    MW: 33952 Da    PI: 5.4868
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.11.1e-29155208155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv+++++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_020677494.1 155 RPRLVWTPQLHKRFVDVIAHL-GIKNAVPKTIMQLMNVDGLTRENVASHLQKYRL 208
                     59*******************.********************************8 PP
2Myb_DNA-binding45.71.5e-14157207148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+++ lG +   +ktI++ m+  g+t++++ s++qky+
   XP_020677494.1 157 RLVWTPQLHKRFVDVIAHLGIKnaVPKTIMQLMNvDGLTRENVASHLQKYR 207
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGKDANQNVV GIDGEGGSDE DRIIDWEDGL PSGDDLTPLS LPLVPPALAS AFSIPPAELK  60
TMLEVHRASQ HTISSLSVRR KPSASSPLNG SLKPLASGGA ADDGNCFMVL EAEDPEESPL  120
SETSGRLPEL GPEEAVDSSA LHGENSVDDQ RALKRPRLVW TPQLHKRFVD VIAHLGIKNA  180
VPKTIMQLMN VDGLTRENVA SHLQKYRLYL KRMQGFSNEG PSSSDHVFAS TTVQQNLQEL  240
QQQPRPPSMP MPYNVPTMIP MPIYAIPHHP SHGVVPLNNH QGGMSCHGFD AHNPYGANNW  300
AGSRDEQNTH EGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.24e-57G2-like family protein