PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677547.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 224aa    MW: 23578.5 Da    PI: 8.0744
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.0001880102123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ Cgk F +   L  H  +H
  XP_020677547.1  80 YKCSVCGKAFASYQALGGHKASH 102
                     9***********99998888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MAFDAMTEPP MVTSEDTSSP PQPRVEGWAK RKRSKRHRYF DHQPTEEEYL ALCLLMLARG  60
GADQRLPPLP FTPPAEGLSY KCSVCGKAFA SYQALGGHKA SHRKHPGGAV DDAASSASGS  120
SAVIASAGGK VHRCSICQKE FSTGQALGGH KRCHYDGSGA AAAAAAAAAS SSSEVASSGQ  180
REFDLNIPAA AEFVFEGSWR CVGTEDGEVQ SPLALKKPRF LIPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-46C2H2 family protein