PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677555.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family G2-like
Protein Properties Length: 329aa    MW: 35975.2 Da    PI: 6.6329
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.25e-30164217155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_020677555.1 164 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVDGLTRENVASHLQKYRL 217
                     59*******************.********************************8 PP
2Myb_DNA-binding47.54.1e-15166216148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+  g+t++++ s++qky+
   XP_020677555.1 166 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvDGLTRENVASHLQKYR 216
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MAEDSGERDS VRLPPEDDAD GGVRDGRGVH GDDVRVLEWV DGLPSGEDLI PLSQPLVSPE  60
LAAAFSIPPP DLKTMLDIHR ATQHTISNLR RQQNPSKSTT AAAPPKPFSA ADPKESSTSQ  120
KPSRCTDQGL ESSAMETIAE IEGDSSSLPT ENSAEDNSGR MPKRPRLVWT PQLHKRFVDV  180
VAHLGIKNAV PKTIMQLMNV DGLTRENVAS HLQKYRLYLK RMQGLSNDGP SSSDHLFAST  240
PVPQSLQEQP MPYAVPTMIP MQVYGIPHHH AHGVVPVNNH LAGRLYNGFD SFQPYAHNDW  300
SGGSKFASIV SNAHVSPNDN NRTGEKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.26e-72G2-like family protein