PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677748.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 219aa    MW: 24140.1 Da    PI: 9.5329
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62.1e-202171155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    sg+ GVr+++ +grWvAeI+d s   +r r +lg+f+taeeAa+a+++a+++l+g
  XP_020677748.1 21 SGFVGVRQRP-SGRWVAEIKDSS---QRIRLWLGTFDTAEEAARAYDEAARALRG 71
                    79********.7*********43...36*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MMSACEEQKM KKQARKGDSR SGFVGVRQRP SGRWVAEIKD SSQRIRLWLG TFDTAEEAAR  60
AYDEAARALR GDNTRTNFTA GGSGGVGSIG WPEYCYQADH LSMTAKARLS RSIRGMVERS  120
AAQRRSTRVS DHHTMARIFH PQRMLSVEFA GGGEVGEDEK TWPWEFGLDL AMAEIEGGLE  180
EEKVDQKVKR FKVSSSVIVP PSFSSSASAA TATTVEKIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18ERF family protein