PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677790.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 223aa    MW: 24441.6 Da    PI: 6.6267
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.5e-053381254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  + erE+  Rd++N+ f+eL   l +a     + + Ka+iL  A++ +++L
  XP_020677790.1 33 KIHKAEREKLKRDHLNELFFELSHALDPA----RQNNGKATILCDATRLLRDL 81
                    567889********************998....67899999999999988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MVSEACPSMG RVAEKPLNGS VPGKKIRGKV PKKIHKAERE KLKRDHLNEL FFELSHALDP  60
ARQNNGKATI LCDATRLLRD LITQVGSLKK ENVALLNESH YVTIEKNELE DDNAALHGDI  120
DRLQNQIQES VDPPPISEPN CSALPSQNSS VAPVFVLPLS QDLQQAIADV AGPLSSPKPS  180
SHISRPHARY PTPDSWSLEF LSRNLEASGG AYSNCWQEGV DKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.21e-40bHLH family protein