PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677881.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 231aa    MW: 24602.7 Da    PI: 9.604
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-202372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  XP_020677881.1 23 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 72
                    69*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MAPREKGTGS GRIAGGDVAK AVHFRGVRKR PWGRYAAEIR DPGKKSRVWL GTFDTAEEAA  60
RAYDAAAREF RGSKAKTNFP CAEPYLSPSS QSSTVESSSR DAASTLPPLA TPLPHLDLDQ  120
INRGGLRFPF QRFPANATAL APPFLFFDPF VRSNMMGNLA ATVAVAGGQH HGLLTLESPM  180
MARNFHAPAH SGVQSDSDSS SVVDAQPLSS PPARIGLGIE IDLNLPPPAE T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-24ERF family protein