PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020678210.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 409aa MW: 43326.8 Da PI: 6.8062

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020678210.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.4	2.4e-21	302	363	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN +L+ e++++kke ++l + XP_020678210.1 302 ERELKRQKRKQSNRESARRSRLRKQAECEELAHRVEVLKEENASLRAEVNRIKKEHEQLILQ 363 89*******************************************************99655 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MGNSEADTPS KAPKALAAQE QPSVTSTTPA TPVYPDWSTF QAYSPIPPPG FFHSAVGSSP 60 PPHPYIWGAQ HLMPPYGTPP PYVMYPHGGI YAHPPMAPGS LPFSPYAMAS PNGNAEASGA 120 FPGSEAEGKS SEGKEKSPIK RSKGSLGSLN LITGKNSELG KNSAASGNGA YSQSGDSGSE 180 ASSEGSDANS QNDSPQKTGD AQNSSDAITH QNGNYAHGTT AHGLQNGTAR GSAQSMVGQT 240 MAIVPMPTGT VTGPTTNLNI GMDFWGATNP STIPPIHGKV PATAVATPMI PGATSELWMQ 300 DERELKRQKR KQSNRESARR SRLRKQAECE ELAHRVEVLK EENASLRAEV NRIKKEHEQL 360 ILQNASLKER LGEIPKGTKE LSHENPAEDY LEQNLDSDGK GREADAGRK

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MGNSEADTPS KAPKALAAQE QPSVTSTTPA TPVYPDWSTF QAYSPIPPPG FFHSAVGSSP  60
PPHPYIWGAQ HLMPPYGTPP PYVMYPHGGI YAHPPMAPGS LPFSPYAMAS PNGNAEASGA  120
FPGSEAEGKS SEGKEKSPIK RSKGSLGSLN LITGKNSELG KNSAASGNGA YSQSGDSGSE  180
ASSEGSDANS QNDSPQKTGD AQNSSDAITH QNGNYAHGTT AHGLQNGTAR GSAQSMVGQT  240
MAIVPMPTGT VTGPTTNLNI GMDFWGATNP STIPPIHGKV PATAVATPMI PGATSELWMQ  300
DERELKRQKR KQSNRESARR SRLRKQAECE ELAHRVEVLK EENASLRAEV NRIKKEHEQL  360
ILQNASLKER LGEIPKGTKE LSHENPAEDY LEQNLDSDGK GREADAGRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	319	325	RRSRLRK
2	319	326	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-110	bZIP family protein