PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020678212.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 395aa MW: 41860.3 Da PI: 6.6881

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020678212.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.5	2.3e-21	288	349	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN +L+ e++++kke ++l + XP_020678212.1 288 ERELKRQKRKQSNRESARRSRLRKQAECEELAHRVEVLKEENASLRAEVNRIKKEHEQLILQ 349 89*******************************************************99655 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MGNSEADTPS KAPKALAAQE QPSVTSTTPA TPVYPDWSTF QAYSPIPPPG FFHSAVGSSP 60 PPHPYIWGAQ HLMPPYGTPP PYVMYPHGGI YAHPPMAPGS LPFSPYAMAS PNGNAEASGA 120 FPGSEAEGKS SEGKEKSPIK RSKGSLGSLN LITGKNSELG KNSAASGNGA YSQSGDSGSE 180 ASSEGSDANS QNDSPQKTGD AQNSSDAHGL QNGTARGSAQ SMVGQTMAIV PMPTGTVTGP 240 TTNLNIGMDF WGATNPSTIP PIHGKVPATA VATPMIPGAT SELWMQDERE LKRQKRKQSN 300 RESARRSRLR KQAECEELAH RVEVLKEENA SLRAEVNRIK KEHEQLILQN ASLKERLGEI 360 PKGTKELSHE NPAEDYLEQN LDSDGKGREA DAGRK

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MGNSEADTPS KAPKALAAQE QPSVTSTTPA TPVYPDWSTF QAYSPIPPPG FFHSAVGSSP  60
PPHPYIWGAQ HLMPPYGTPP PYVMYPHGGI YAHPPMAPGS LPFSPYAMAS PNGNAEASGA  120
FPGSEAEGKS SEGKEKSPIK RSKGSLGSLN LITGKNSELG KNSAASGNGA YSQSGDSGSE  180
ASSEGSDANS QNDSPQKTGD AQNSSDAHGL QNGTARGSAQ SMVGQTMAIV PMPTGTVTGP  240
TTNLNIGMDF WGATNPSTIP PIHGKVPATA VATPMIPGAT SELWMQDERE LKRQKRKQSN  300
RESARRSRLR KQAECEELAH RVEVLKEENA SLRAEVNRIK KEHEQLILQN ASLKERLGEI  360
PKGTKELSHE NPAEDYLEQN LDSDGKGREA DAGRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	305	311	RRSRLRK
2	305	312	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-110	bZIP family protein