PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020678799.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

DBB

Protein Properties

Length: 179aa MW: 19359.8 Da PI: 6.2855

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020678799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.3	6.6e-08	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e+ e+ C ++ lC dC ++ H H++vpl XP_020678799.1 4 QCDACEKAEAVVLCCADEAALCWDCDEKVHAAnklagkHQRVPL 47 7*****************************66899999999986 PP
2	zf-B_box	28.8	2.5e-09	59	99	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + C+ ++ek +fC +++ llC+ C l++H+ H XP_020678799.1 59 LPGCDICQEKAGYFFCLEDRALLCRHCDLTIHSAspfvshH 99 667*****************************667777755 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MKIQCDACEK AEAVVLCCAD EAALCWDCDE KVHAANKLAG KHQRVPLLLP SAASATSKLP 60 GCDICQEKAG YFFCLEDRAL LCRHCDLTIH SASPFVSHHQ RFLITGARVA LQHYLTNNSS 120 SNRSSAAVNE FSNSSGSIGN SSNPAGSLAS TSLAVEKTEG FKPNWPWNEI FEGPDFDHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-53	DBB family protein