PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020678830.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 147aa    MW: 16174.9 Da    PI: 4.7698
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020678830.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.83.1e-141563355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ykGVr +k +g+Wv+eIr+p   g r r +lg++ ++e Aa a++ a   l+g
  XP_020678830.1 15 YKGVRCRK-QGKWVSEIRVP---GSRDRLWLGTYRSPEAAAVAHDTAFFLLRG 63
                    9****887.9*********8...435*******************99777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MSSSNGNILG DDRNYKGVRC RKQGKWVSEI RVPGSRDRLW LGTYRSPEAA AVAHDTAFFL  60
LRGPSSKGLN FPDRAANMQW VSLSPRSVQR VASESGMDFD AKLIGQSSQI FEREESSNGD  120
GFGPSGDGSL NYDGYEDISV DDMEILM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.11e-31ERF family protein