PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020678876.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 352aa MW: 38907.1 Da PI: 5.0758

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020678876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.1	1.5e-31	222	277	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv a++qLGG+++AtPk+i+elm v+gLt+++vkSHLQkYRl+ XP_020678876.1 222 KARRCWSPELHRRFVMALQQLGGAQVATPKQIRELMMVDGLTNDEVKSHLQKYRLH 277 68****************************************************97 PP
2	Myb_DNA-binding	39.8	1e-12	224	275	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a +qlGg t+k I + m g+t ++ks++qky+ XP_020678876.1 224 RRCWSPELHRRFVMALQQLGGAqvaTPKQIRELMMvDGLTNDEVKSHLQKYR 275 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGSLMAELGL DLKLFTKKTI GCFLKNEMKL KDFVGLLEEE RQKIEAFKRE LPLCMILVND 60 VIDELKLEAE QCQGGDGVIE EEFIPLKARS DEEDKEDQKD VKLEKDNMEK MDWMSSVQLW 120 NDNCSDESVN FKKDSHKQQN GDAVSLESKS RSAGIGAFLP LKVILTRNEE KTLSISLPDL 180 PTAISAPTAT TSAVASDNRI IGQSAPSTSA GSAYLVLQAQ RKARRCWSPE LHRRFVMALQ 240 QLGGAQVATP KQIRELMMVD GLTNDEVKSH LQKYRLHTRR MPSSTATEAN KAVAMVGSLW 300 ASQDQSQISQ QSVTQFGSPQ GPLQLACTAQ ALSATGGDSC EDDGRSESYS WK

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGSLMAELGL DLKLFTKKTI GCFLKNEMKL KDFVGLLEEE RQKIEAFKRE LPLCMILVND  60
VIDELKLEAE QCQGGDGVIE EEFIPLKARS DEEDKEDQKD VKLEKDNMEK MDWMSSVQLW  120
NDNCSDESVN FKKDSHKQQN GDAVSLESKS RSAGIGAFLP LKVILTRNEE KTLSISLPDL  180
PTAISAPTAT TSAVASDNRI IGQSAPSTSA GSAYLVLQAQ RKARRCWSPE LHRRFVMALQ  240
QLGGAQVATP KQIRELMMVD GLTNDEVKSH LQKYRLHTRR MPSSTATEAN KAVAMVGSLW  300
ASQDQSQISQ QSVTQFGSPQ GPLQLACTAQ ALSATGGDSC EDDGRSESYS WK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-51	G2-like family protein