PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020678904.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 210aa    MW: 22952.7 Da    PI: 8.3428
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020678904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19116165255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeI+dp+    r  r +lg+f taeeAa+a+++a+ +++g
  XP_020678904.1 116 QYRGVRQRP-WGKWAAEIHDPR----RaVRKWLGTFETAEEAARAYDNAAIEFRG 165
                     6********.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MAFNQQLNFD NSQLHFPASL SPMESTPLPS INSRRLSHDQ ENTIIVAALV HVLSGEPQET  60
APAIYFPLAA DLPRCQVCGI GSDGCLGCHF FESSPADNAE GSGIRRRIRR RKKKNQYRGV  120
RQRPWGKWAA EIHDPRRAVR KWLGTFETAE EAARAYDNAA IEFRGARAKL NFPFPDQIST  180
GPQSSAAAEA ADSSLATAVS RGSGEEMGGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106114RRIRRRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.17e-35ERF family protein