PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020678982.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 165aa    MW: 18075.4 Da    PI: 11.9337
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020678982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.0005971321555
                     HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++++++  L +l+P +     kKl  a++L ++ +Y+  Lq
  XP_020678982.1  97 KVRDRLRVLSRLVPGC-----KKLPAASVLSETADYVAALQ 132
                     78999999*******9.....9***************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MSKWQSKKQQ WIYGRRLLEA LRSARSGRTG PLVIKKAADS ALALSVRGQS RWSRAILFGP  60
CRGGKPKLKL KACSKIPRHR PFLSAGKLVA AQTKGRKVRD RLRVLSRLVP GCKKLPAASV  120
LSETADYVAA LQMQVNTMRV LAEVLSTSAV VATRGDGELG VEELR