PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020679046.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 147aa    MW: 17165.6 Da    PI: 10.3245
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020679046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer62.86.8e-20354357
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                    +v+Y+eClkN+ ++ G h+vDGC+ f + ++    +a ++CaAC CHR+FHR++ 
  XP_020679046.1  3 AVEYRECLKNQCVAPGFHTVDGCQFFFSGND---PSAVFNCAACSCHRSFHRKNF 54
                    799*********************9999844...46899**************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MAAVEYRECL KNQCVAPGFH TVDGCQFFFS GNDPSAVFNC AACSCHRSFH RKNFLKREPE  60
RSPSTAESST SRPRAGGIRR KKELFRRRRR RFTAEQKEKM LACASLLGWR VGWLRAEVES  120
FCEEVGIEEK AFFNWMRNNK RKYETKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17991RRKKELFRRRRRR
28691RRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-25ZF-HD family protein