PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020679134.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 181aa    MW: 20350.6 Da    PI: 5.2861
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020679134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.62e-151759248
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                    +ykGVr +k +g+Wv+e+r p++   r r++lg+++++e+Aa+a +a
  XP_020679134.1 17 KYKGVRKRK-WGKWVSEVRLPNS---RERIWLGSYDSPEKAARAFDA 59
                    8*****999.*******999833...5*****************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MTDQAESSAA AAASAAKYKG VRKRKWGKWV SEVRLPNSRE RIWLGSYDSP EKAARAFDAG  60
SFLLRGDRAS LNFPDRAQEI AMYCARRNPT AQQIQTAAAR YAHADLPAPS QPSQPVLQVA  120
EESPPSPATM TSQWELLEQF MAPAFPHIDE LHYEFHLDER LDQMDVESGW DSDHSPSLWT  180
F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11925KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.11e-36ERF family protein