PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020679351.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 189aa    MW: 21769.3 Da    PI: 7.4708
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020679351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.4e-051739123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C++C+++F+++  L  H++ H
  XP_020679351.1 17 FNCNYCHRVFTTSQALGGHQNGH 39
                    78*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MSNVEEEVIQ GMQSKVFNCN YCHRVFTTSQ ALGGHQNGHR RERELVKRAQ RHAQLLANPM  60
HHHSLRLTNS PYIDRRSSFL YGLESASHQL LTLPLPLMNH NPLYYQPYSL PYEYYGERRG  120
EVRVSRFNEM RHEPTLNVGR KPSSNSTSVN LELALFKGSD SHGDHIDGKE ISATDEEKKS  180
DEVDLTLHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.13e-15C2H2 family protein